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SSSM5_015 endolysin [ Synechococcus phage S-SSM5 ]

Gene ID: 10329347, updated on 8-Jan-2023

Summary

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Gene symbol
SSSM5_015
Gene description
endolysin
Locus tag
SSSM5_015
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Synechococcus phage S-SSM5 (strain: 8102-12)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Kyanoviridae; Glaucusvirus; Glaucusvirus ssm5
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Genomic context

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Sequence:
NC_015289.1 (9784..12645)

NC_015289.1Genomic Context describing neighboring genes Neighboring gene baseplate hub Neighboring gene endolysin Neighboring gene baseplate hub assembly catalyst Neighboring gene tail protein Neighboring gene CP12 Neighboring gene 2OG-Fe(II) oxygenase Neighboring gene tRNA-Val Neighboring gene CpeT-like antenna protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_015289.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Sullivan MB, et al. Environ Microbiol, 2010 Nov. PMID 20662890, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
endolysin
YP_004324621.1
  • T4-LIKE GC: 607; similar to Synechococcus phage S-SM1 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015289.1 Reference assembly

    Range
    9784..12645
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004324621.1 endolysin [Synechococcus phage S-SSM5]

    See identical proteins and their annotated locations for YP_004324621.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E3SK58
    Conserved Domains (2) summary
    cl00222
    Location:426 → 557
    lysozyme_like; lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. ...
    cl01194
    Location:620 → 746
    Peptidase_M15_3; Peptidase M15
Nucleotide Protein
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