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gp5 baseplate hub and tail lysozyme [ Synechococcus phage S-SSM5 ]

Gene ID: 10329340, updated on 8-Jan-2023

Summary

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Gene symbol
gp5
Gene description
baseplate hub and tail lysozyme
Locus tag
SSSM5_023
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Synechococcus phage S-SSM5 (strain: 8102-12)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Kyanoviridae; Glaucusvirus; Glaucusvirus ssm5
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Genomic context

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Sequence:
NC_015289.1 (16254..18797)

NC_015289.1Genomic Context describing neighboring genes Neighboring gene CpeT-like antenna protein Neighboring gene tRNA-Val Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Phd-like antitoxin Neighboring gene hypothetical protein Neighboring gene tRNA-Leu

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_015289.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Sullivan MB, et al. Environ Microbiol, 2010 Nov. PMID 20662890, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
baseplate hub and tail lysozyme
YP_004324628.1
  • T4-LIKE GC: 340; similar to Synechococcus phage S-SM1 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015289.1 Reference assembly

    Range
    16254..18797
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004324628.1 baseplate hub and tail lysozyme [Synechococcus phage S-SSM5]

    See identical proteins and their annotated locations for YP_004324628.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E3SK65
    Conserved Domains (2) summary
    pfam06714
    Location:54 → 113
    Gp5_OB; Gp5 N-terminal OB domain
    cl21456
    Location:238 → 364
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
Nucleotide Protein
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Gene LinkOut

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