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ASPH aspartate beta-hydroxylase [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103287703, updated on 30-Mar-2024

Summary

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Gene symbol
ASPH
Gene description
aspartate beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See ASPH in Genome Data Viewer
Location:
chromosome: 19
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 19 NC_072491.1 (33159581..33327190, complement)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370670.1 (5322178..5504271)

Chromosome 19 - NC_072491.1Genomic Context describing neighboring genes Neighboring gene probable sodium-coupled neutral amino acid transporter 6 Neighboring gene clavesin 1 Neighboring gene U7 small nuclear RNA Neighboring gene sodium/potassium transporting ATPase interacting 3 Neighboring gene gamma-glutamyl hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072491.1 Reference DD_ASM_mEF_20220401

    Range
    33159581..33327190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028147947.2 → XP_028003748.2  aspartyl/asparaginyl beta-hydroxylase isoform X2

  2. XM_028147943.2 → XP_028003744.2  aspartyl/asparaginyl beta-hydroxylase isoform X1

  3. XM_028147949.2 → XP_028003750.2  aspartyl/asparaginyl beta-hydroxylase isoform X3

  4. XM_028147951.2 → XP_028003752.2  aspartyl/asparaginyl beta-hydroxylase isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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