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LOC103281041 receptor-type tyrosine-protein phosphatase T [ Anolis carolinensis (green anole) ]

Gene ID: 103281041, updated on 15-Feb-2024

Summary

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Gene symbol
LOC103281041
Gene description
receptor-type tyrosine-protein phosphatase T
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
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Genomic context

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See LOC103281041 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943831.1 (425852..483563, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339132.1 (167438..219384)

NW_026943831.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 7 member A Neighboring gene testis associated actin remodelling kinase 1 Neighboring gene beta-1,3-galactosyltransferase 5 Neighboring gene RUN and SH3 domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase T
Names
receptor-type tyrosine-protein phosphatase delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943831.1 Reference rAnoCar3.1.pri

    Range
    425852..483563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062966502.1 → XP_062822572.1  receptor-type tyrosine-protein phosphatase T

RNA

  1. XR_010001484.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases