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B4GALT1 beta-1,4-galactosyltransferase 1 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103277047, updated on 11-Mar-2024

Summary

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Gene symbol
B4GALT1
Gene description
beta-1,4-galactosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See B4GALT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007260565.1 (775789..834998)

NW_007260565.1Genomic Context describing neighboring genes Neighboring gene interferon-induced transmembrane protein 3-like Neighboring gene BAG cochaperone 1 Neighboring gene serine peptidase inhibitor Kazal type 4 Neighboring gene histidine triad nucleotide-binding protein 1 pseudogene Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007260565 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007260565.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    775789..834998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021707249.1 → XP_021562924.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A1U7V4P2
    Conserved Domains (1) summary
    cd00899
    Location:35 → 253
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_008074486.1 → XP_008072677.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A1U7V4P2
    Conserved Domains (1) summary
    cd00899
    Location:35 → 253
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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