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GALK2 galactokinase 2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103272381, updated on 11-Mar-2024

Summary

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Gene symbol
GALK2
Gene description
galactokinase 2
See related
Ensembl:ENSTSYG00000008158
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See GALK2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007256482.1 (210079..404349, complement)

NW_007256482.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 7 Neighboring gene alcohol dehydrogenase class-3-like Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene Neighboring gene COP9 signalosome subunit 2 Neighboring gene transmembrane protein 50B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007256482 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007256482.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    210079..404349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008069892.2 → XP_008068083.1  N-acetylgalactosamine kinase isoform X2

    UniProtKB/TrEMBL
    A0A1U7UHB5
    Related
    ENSTSYP00000030922.1, ENSTSYT00000040283.1
    Conserved Domains (3) summary
    PLN02521
    Location:7 → 444
    PLN02521; galactokinase
    pfam08544
    Location:339 → 419
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:13 → 62
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_021718509.1 → XP_021574184.1  N-acetylgalactosamine kinase isoform X1

    UniProtKB/TrEMBL
    A0A3Q0EDJ0
    Related
    ENSTSYP00000007487.2, ENSTSYT00000008158.2
    Conserved Domains (1) summary
    cl26519
    Location:12 → 456
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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