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POLR1A RNA polymerase I subunit A [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103270050, updated on 11-Mar-2024

Summary

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Gene symbol
POLR1A
Gene description
RNA polymerase I subunit A
See related
Ensembl:ENSTSYG00000002761
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See POLR1A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007253813.1 (281974..357642)

NW_007253813.1Genomic Context describing neighboring genes Neighboring gene inner membrane mitochondrial protein Neighboring gene pentatricopeptide repeat domain 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007253813 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase I subunit RPA1
Names
polymerase (RNA) I polypeptide A, 194kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007253813.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    281974..357642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008067587.2 → XP_008065778.1  DNA-directed RNA polymerase I subunit RPA1

    UniProtKB/TrEMBL
    A0A1U7UAL5
    Related
    ENSTSYP00000002581.2, ENSTSYT00000002815.2
    Conserved Domains (4) summary
    cd02735
    Location:1199 → 1712
    RNAP_I_Rpa1_C; Largest subunit (Rpa1) of Eukaryotic RNA polymerase I (RNAP I), C-terminal domain
    PRK08566
    Location:11 → 1025
    PRK08566; DNA-directed RNA polymerase subunit A'; Validated
    cd01435
    Location:16 → 1004
    RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain
    pfam04998
    Location:958 → 1667
    RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5
Nucleotide Protein
Heading Accession and Version

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