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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103270002, updated on 11-Mar-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007253797.1 (38083..55879)

NW_007253797.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene 60S ribosomal protein L10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007253797 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007253797.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    38083..55879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008067540.2 → XP_008065731.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_008065731.1

    UniProtKB/TrEMBL
    A0A1U7U6L5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  2. XM_008067539.2 → XP_008065730.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_008065730.1

    UniProtKB/TrEMBL
    A0A1U7U6L5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  3. XM_021717331.1 → XP_021573006.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A1U7U6L5
    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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