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AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103269504, updated on 11-Mar-2024

Summary

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Gene symbol
AGPAT5
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 5
See related
Ensembl:ENSTSYG00000025960
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See AGPAT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007253379.1 (153499..222123, complement)

NW_007253379.1Genomic Context describing neighboring genes Neighboring gene suppressor APC domain-containing protein 1 pseudogene Neighboring gene XK related 5 Neighboring gene microcephalin 1 Neighboring gene angiopoietin 2 Neighboring gene putative monooxygenase p33MONOX pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007253379 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007253379.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    153499..222123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008067076.2 → XP_008065267.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X1

    UniProtKB/TrEMBL
    A0A1U7UIX9
    Related
    ENSTSYP00000028326.1, ENSTSYT00000039563.1
    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:258 → 298
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_008067077.2 → XP_008065268.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X2

    UniProtKB/TrEMBL
    A0A1U7U948
    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:258 → 291
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

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