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TKT transketolase [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103268098, updated on 11-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
Ensembl:ENSTSYG00000007064
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007252814.1 (187057..194753, complement)

NW_007252814.1Genomic Context describing neighboring genes Neighboring gene RFT1 homolog Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007252814 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007252814.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    187057..194753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008065660.2 → XP_008063851.2  transketolase

    UniProtKB/TrEMBL
    A0A1U7UD92
    Related
    ENSTSYP00000006468.2, ENSTSYT00000007063.2
    Conserved Domains (1) summary
    cl27366
    Location:32 → 441
    TktA; Transketolase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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