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SGCA sarcoglycan alpha [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103267667, updated on 11-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
See related
Ensembl:ENSTSYG00000034165
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007252291.1 (16273..27630)

NW_007252291.1Genomic Context describing neighboring genes Neighboring gene collagen type I alpha 1 chain Neighboring gene 60S ribosomal protein L30-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007252291 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007252291.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    16273..27630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021716141.1 → XP_021571816.1  alpha-sarcoglycan

    UniProtKB/TrEMBL
    A0A3Q0E8C7
    Related
    ENSTSYP00000016824.1, ENSTSYT00000037007.1
    Conserved Domains (1) summary
    pfam05510
    Location:71 → 405
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
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