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PIGK phosphatidylinositol glycan anchor biosynthesis class K [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103262081, updated on 11-Mar-2024

Summary

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Gene symbol
PIGK
Gene description
phosphatidylinositol glycan anchor biosynthesis class K
See related
Ensembl:ENSTSYG00000009087
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See PIGK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007035723.1 (134673..238688)

NW_007035723.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 5 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007035723 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GPI-anchor transamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI-anchor transamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007035723.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    134673..238688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008059692.1 → XP_008057883.1  GPI-anchor transamidase isoform X1

    UniProtKB/TrEMBL
    A0A1U7TND1
    Related
    ENSTSYP00000008359.2, ENSTSYT00000009115.2
    Conserved Domains (1) summary
    cl00042
    Location:42 → 317
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  2. XM_021713109.1 → XP_021568784.1  GPI-anchor transamidase isoform X3

    UniProtKB/TrEMBL
    A0A3Q0DXB3
    Related
    ENSTSYP00000030248.1, ENSTSYT00000030749.1
    Conserved Domains (1) summary
    cl00042
    Location:50 → 241
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  3. XM_021713107.1 → XP_021568782.1  GPI-anchor transamidase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0E1N1
    Conserved Domains (1) summary
    cl00042
    Location:22 → 297
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
Nucleotide Protein
Heading Accession and Version

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