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GAD2 glutamate decarboxylase 2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103259502, updated on 18-Sep-2024

Summary

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Gene symbol
GAD2
Gene description
glutamate decarboxylase 2
See related
Ensembl:ENSTSYG00000004676
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See GAD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007246917.1 (103805..182187)

NW_007246917.1Genomic Context describing neighboring genes Neighboring gene myosin IIIA Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein Neighboring gene UPF0061 protein ETA_18310-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007246917 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyrate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate decarboxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007246917.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    103805..182187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008057163.2 → XP_008055354.1  glutamate decarboxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U7T5M7
    Related
    ENSTSYP00000004270.2, ENSTSYT00000004676.2
    Conserved Domains (1) summary
    pfam00282
    Location:145 → 516
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain

  2. XM_021711882.1 → XP_021567557.1  glutamate decarboxylase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0DY76
    Conserved Domains (1) summary
    pfam00282
    Location:149 → 520
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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