U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGPS alkylglycerone phosphate synthase [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103259357, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
See related
Ensembl:ENSTSYG00000004443
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007246713.1 (49055..197444, complement)

NW_007246713.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 30B-like Neighboring gene elongin-C-like Neighboring gene histone H2A.V-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_007246713 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007246713.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    49055..197444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008057032.2 → XP_008055223.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

    UniProtKB/TrEMBL
    A0A1U7TFN5
    Related
    ENSTSYP00000004102.2, ENSTSYT00000004480.2
    Conserved Domains (3) summary
    COG0277
    Location:194 → 646
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:200 → 341
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:378 → 651
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.