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SUCLA2 succinate-CoA ligase ADP-forming subunit beta [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103259277, updated on 11-Mar-2024

Summary

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Gene symbol
SUCLA2
Gene description
succinate-CoA ligase ADP-forming subunit beta
See related
Ensembl:ENSTSYG00000008301
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See SUCLA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007246678.1 (930490..994643)

NW_007246678.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 4 Neighboring gene nudix hydrolase 15 Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP1A pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007246678 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
Names
succinate-CoA ligase ADP-forming beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007246678.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    930490..994643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008056956.2 → XP_008055147.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A1U7TQ21
    Related
    ENSTSYP00000007616.2, ENSTSYT00000008296.2
    Conserved Domains (3) summary
    PRK00696
    Location:55 → 445
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:321 → 441
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:55 → 262
    ATP-grasp_2; ATP-grasp domain

  2. XM_008056958.2 → XP_008055149.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A1U7T519
    Conserved Domains (3) summary
    PRK00696
    Location:55 → 402
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:278 → 398
    Ligase_CoA; CoA-ligase
    cl17255
    Location:55 → 219
    ATP-grasp_4; ATP-grasp domain

  3. XM_021711780.1 → XP_021567455.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A3Q0DZI7
    Conserved Domains (1) summary
    PRK00696
    Location:33 → 423
    sucC; succinyl-CoA synthetase subunit beta; Provisional

  4. XM_008056957.2 → XP_008055148.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A1U7TFF9
    Conserved Domains (3) summary
    PRK00696
    Location:41 → 431
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:307 → 427
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:41 → 248
    ATP-grasp_2; ATP-grasp domain
Nucleotide Protein
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