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LPIN1 lipin 1 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103255848, updated on 11-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
See related
Ensembl:ENSTSYG00000003627
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007232549.1 (194618..356896, complement)

NW_007232549.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007232549 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007232549.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    194618..356896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021710338.1 → XP_021566013.1  phosphatidate phosphatase LPIN1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0DWA5
    Related
    ENSTSYP00000003311.2, ENSTSYT00000003614.2
    Conserved Domains (3) summary
    pfam04571
    Location:31 → 137
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:693 → 918
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:531 → 621
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_021710337.1 → XP_021566012.1  phosphatidate phosphatase LPIN1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0DTZ2
    Conserved Domains (3) summary
    pfam04571
    Location:31 → 137
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:719 → 944
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:531 → 647
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_021710339.1 → XP_021566014.1  phosphatidate phosphatase LPIN1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0DNS1
    Related
    ENSTSYP00000016666.1, ENSTSYT00000027124.1
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:627 → 852
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:465 → 555
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
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