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HEXD hexosaminidase D [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103253914, updated on 11-Mar-2024

Summary

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Gene symbol
HEXD
Gene description
hexosaminidase D
See related
Ensembl:ENSTSYG00000001214
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Also known as
HEXDC
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007201339.1 (219005..241250)

NW_007201339.1Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene chromosome unknown C17orf62 homolog Neighboring gene nuclear prelamin A recognition factor Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007201339 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007201339.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    219005..241250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008052118.1 → XP_008050309.1  hexosaminidase D

    UniProtKB/TrEMBL
    A0A1U7SR29
    Related
    ENSTSYP00000001121.2, ENSTSYT00000001213.2
    Conserved Domains (1) summary
    cd06565
    Location:9 → 323
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...
Nucleotide Protein
Heading Accession and Version

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