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LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103252585, updated on 11-Mar-2024

Summary

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Gene symbol
LPCAT1
Gene description
lysophosphatidylcholine acyltransferase 1
See related
Ensembl:ENSTSYG00000025445
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See LPCAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007113121.1 (4..15631, complement)

NW_007113121.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L36 Neighboring gene NADH:ubiquinone oxidoreductase subunit S6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007113121 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007113121.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    4..15631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008051177.1 → XP_008049368.1  lysophosphatidylcholine acyltransferase 1

    UniProtKB/TrEMBL
    A0A1U7SZ01
    Related
    ENSTSYP00000030153.1, ENSTSYT00000048334.1
    Conserved Domains (3) summary
    cd07991
    Location:55 → 266
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG0204
    Location:22 → 194
    PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
    cl08302
    Location:317 → 355
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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