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LMAN2 lectin, mannose binding 2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103250468, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2
Gene description
lectin, mannose binding 2
See related
Ensembl:ENSTSYG00000010704
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See LMAN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007074567.1 (13442..41580)

NW_007074567.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007074567 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular integral-membrane protein VIP36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007074567.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    13442..41580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021708042.1 → XP_021563717.1  vesicular integral-membrane protein VIP36 isoform X2

    UniProtKB/TrEMBL
    A0A1U7SHA5
    Conserved Domains (1) summary
    cd06901
    Location:53 → 301
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  2. XM_021708041.1 → XP_021563716.1  vesicular integral-membrane protein VIP36 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0DL71
    Conserved Domains (1) summary
    cd06901
    Location:53 → 304
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_021708043.1 → XP_021563718.1  vesicular integral-membrane protein VIP36 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0DPJ9
    Conserved Domains (1) summary
    cd06901
    Location:53 → 301
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  4. XM_008049058.2 → XP_008047249.1  vesicular integral-membrane protein VIP36 isoform X2

    UniProtKB/TrEMBL
    A0A1U7SHA5
    Related
    ENSTSYP00000009818.2, ENSTSYT00000010713.2
    Conserved Domains (1) summary
    cd06901
    Location:53 → 301
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain
Nucleotide Protein
Heading Accession and Version

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