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GLB1L3 galactosidase beta 1 like 3 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248897, updated on 11-Mar-2024

Summary

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Gene symbol
GLB1L3
Gene description
galactosidase beta 1 like 3
See related
Ensembl:ENSCSAG00000002114
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See GLB1L3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (647520..688581, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (125359514..125400427)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucuronyltransferase 1 Neighboring gene galactosidase beta 1 like 2 Neighboring gene uncharacterized LOC103248898 Neighboring gene uncharacterized LOC119626494 Neighboring gene acyl-CoA dehydrogenase family member 8 Neighboring gene thymocyte nuclear protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase-1-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    647520..688581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038004963.1 → XP_037860891.1  beta-galactosidase-1-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A0D9S4Y7
    Conserved Domains (2) summary
    pfam01301
    Location:106 → 403
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:582 → 645
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  2. XM_008021585.2 → XP_008019776.2  beta-galactosidase-1-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A0D9S4Y7
    Conserved Domains (2) summary
    pfam01301
    Location:106 → 415
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:594 → 657
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  3. XM_038004962.1 → XP_037860890.1  beta-galactosidase-1-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A0D9S4Y7
    Conserved Domains (2) summary
    pfam01301
    Location:106 → 415
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:594 → 659
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  4. XM_008021586.2 → XP_008019777.2  beta-galactosidase-1-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A0D9S4Y7
    Conserved Domains (2) summary
    pfam01301
    Location:80 → 389
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:568 → 631
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  5. XM_008021587.2 → XP_008019778.2  beta-galactosidase-1-like protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A0D9S4Y7
    Conserved Domains (2) summary
    pfam01301
    Location:80 → 389
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:568 → 633
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  6. XM_038004965.1 → XP_037860893.1  beta-galactosidase-1-like protein 3 isoform X7

    Conserved Domains (1) summary
    pfam01301
    Location:106 → 415
    Glyco_hydro_35; Glycosyl hydrolases family 35

  7. XM_038004964.1 → XP_037860892.1  beta-galactosidase-1-like protein 3 isoform X6

    Conserved Domains (1) summary
    pfam01301
    Location:106 → 415
    Glyco_hydro_35; Glycosyl hydrolases family 35
Nucleotide Protein
Heading Accession and Version

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