U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NTM neurotrimin [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248859, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NTM
Gene description
neurotrimin
See related
Ensembl:ENSCSAG00000002149
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NTM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (2652069..3694480, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (122405280..123378287)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene opioid binding protein/cell adhesion molecule like Neighboring gene uncharacterized LOC119626401 Neighboring gene uncharacterized LOC103248875 Neighboring gene uncharacterized LOC119626406 Neighboring gene 60S ribosomal protein L37-like Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC103248847 Neighboring gene sorting nexin 19

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
neurotrimin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    2652069..3694480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008021542.2 → XP_008019733.1  neurotrimin isoform X3

    See identical proteins and their annotated locations for XP_008019733.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (4) summary
    smart00408
    Location:149 → 205
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:233 → 310
    IG_like; Immunoglobulin like
    pfam00047
    Location:226 → 308
    ig; Immunoglobulin domain
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  2. XM_008021538.2 → XP_008019729.1  neurotrimin isoform X1

    See identical proteins and their annotated locations for XP_008019729.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Related
    ENSCSAP00000015886.1
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  3. XM_038004840.1 → XP_037860768.1  neurotrimin isoform X6

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  4. XM_008021544.2 → XP_008019735.1  neurotrimin isoform X4

    See identical proteins and their annotated locations for XP_008019735.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  5. XM_008021540.2 → XP_008019731.1  neurotrimin isoform X2

    See identical proteins and their annotated locations for XP_008019731.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  6. XM_008021541.2 → XP_008019732.1  neurotrimin isoform X2

    See identical proteins and their annotated locations for XP_008019732.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  7. XM_008021545.2 → XP_008019736.1  neurotrimin isoform X5

    See identical proteins and their annotated locations for XP_008019736.1

    UniProtKB/TrEMBL
    A0A0D9S4U7
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.