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ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248797, updated on 11-Mar-2024

Summary

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Gene symbol
ST3GAL4
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
See related
Ensembl:ENSCSAG00000002253
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See ST3GAL4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (8530719..8590666, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (117479328..117543262)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein KIRREL3-AS3 Neighboring gene kirre like nephrin family adhesion molecule 3 Neighboring gene uncharacterized LOC119626409 Neighboring gene uncharacterized LOC103248790 Neighboring gene decapping enzyme, scavenger Neighboring gene TIR domain containing adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    8530719..8590666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008021453.2 → XP_008019644.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

    See identical proteins and their annotated locations for XP_008019644.1

    UniProtKB/TrEMBL
    A0A0D9S4J6
    Conserved Domains (1) summary
    pfam00777
    Location:84 → 331
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_038004847.1 → XP_037860775.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:87 → 327
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_038004848.1 → XP_037860776.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:87 → 327
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_008021454.2 → XP_008019645.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

    See identical proteins and their annotated locations for XP_008019645.1

    UniProtKB/TrEMBL
    A0A0D9S4J6
    Related
    ENSCSAP00000015785.1
    Conserved Domains (1) summary
    pfam00777
    Location:84 → 331
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_008021452.2 → XP_008019643.2  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:112 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_038004849.1 → XP_037860777.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X4

    Conserved Domains (1) summary
    pfam00777
    Location:87 → 233
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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