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NCAM1 neural cell adhesion molecule 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248479, updated on 11-Mar-2024

Summary

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Gene symbol
NCAM1
Gene description
neural cell adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See NCAM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (21358968..21671871, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (104332622..104647258)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and kinase domain containing 1 Neighboring gene tetratricopeptide repeat domain 12 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC119626577 Neighboring gene uncharacterized LOC103248471 Neighboring gene U6 spliceosomal RNA Neighboring gene hsc70-interacting protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    21358968..21671871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038005212.1 → XP_037861140.1  neural cell adhesion molecule 1 isoform X13

    Conserved Domains (7) summary
    cd05869
    Location:306 → 402
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124 → 190
    IG; Immunoglobulin
    pfam00041
    Location:602 → 683
    fn3; Fibronectin type III domain
    pfam13927
    Location:411 → 483
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  2. XM_038005206.1 → XP_037861134.1  neural cell adhesion molecule 1 isoform X7

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 402
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam05109
    Location:824 → 1104
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:602 → 683
    fn3; Fibronectin type III domain
    pfam13927
    Location:411 → 483
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  3. XM_038005211.1 → XP_037861139.1  neural cell adhesion molecule 1 isoform X12

    Conserved Domains (7) summary
    cd05869
    Location:306 → 402
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam00041
    Location:603 → 684
    fn3; Fibronectin type III domain
    pfam13927
    Location:411 → 483
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  4. XM_038005201.1 → XP_037861129.1  neural cell adhesion molecule 1 isoform X2

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 402
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124 → 190
    IG; Immunoglobulin
    pfam05109
    Location:846 → 1126
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:624 → 705
    fn3; Fibronectin type III domain
    pfam13927
    Location:411 → 483
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  5. XM_038005210.1 → XP_037861138.1  neural cell adhesion molecule 1 isoform X11

    Conserved Domains (7) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam00041
    Location:612 → 693
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  6. XM_038005205.1 → XP_037861133.1  neural cell adhesion molecule 1 isoform X6

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam05109
    Location:834 → 1114
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:612 → 693
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  7. XM_038005209.1 → XP_037861137.1  neural cell adhesion molecule 1 isoform X10

    Conserved Domains (7) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam00041
    Location:613 → 694
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  8. XM_038005204.1 → XP_037861132.1  neural cell adhesion molecule 1 isoform X5

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam05109
    Location:835 → 1115
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:613 → 694
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  9. XM_038005203.1 → XP_037861131.1  neural cell adhesion molecule 1 isoform X4

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam05109
    Location:839 → 1119
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:617 → 698
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  10. XM_038005202.1 → XP_037861130.1  neural cell adhesion molecule 1 isoform X3

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124 → 190
    IG; Immunoglobulin
    pfam05109
    Location:840 → 1120
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:618 → 699
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  11. XM_038005208.1 → XP_037861136.1  neural cell adhesion molecule 1 isoform X9

    Conserved Domains (7) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124 → 190
    IG_like; Immunoglobulin like
    pfam00041
    Location:634 → 715
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  12. XM_038005200.1 → XP_037861128.1  neural cell adhesion molecule 1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (8) summary
    cd05869
    Location:306 → 412
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124 → 190
    IG; Immunoglobulin
    pfam05109
    Location:856 → 1136
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:634 → 715
    fn3; Fibronectin type III domain
    pfam13927
    Location:421 → 493
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  13. XM_038005207.1 → XP_037861135.1  neural cell adhesion molecule 1 isoform X8

    UniProtKB/TrEMBL
    A0A0D9S2Z2
    Conserved Domains (7) summary
    cd05869
    Location:188 → 284
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:6 → 72
    IG; Immunoglobulin
    pfam05109
    Location:707 → 987
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:485 → 566
    fn3; Fibronectin type III domain
    pfam13927
    Location:293 → 365
    Ig_3; Immunoglobulin domain
    cd00096
    Location:93 → 98
    Ig; Ig strand A [structural motif]
    cl11960
    Location:93 → 189
    Ig; Immunoglobulin domain

  14. XM_008020884.2 → XP_008019075.1  neural cell adhesion molecule 1 isoform X18

    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 402
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:418 → 486
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:498 → 595
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:602 → 683
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  15. XM_038005213.1 → XP_037861141.1  neural cell adhesion molecule 1 isoform X17

    Conserved Domains (7) summary
    cd05869
    Location:306 → 402
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124 → 190
    IG; Immunoglobulin
    pfam00041
    Location:603 → 684
    fn3; Fibronectin type III domain
    pfam13927
    Location:411 → 483
    Ig_3; Immunoglobulin domain
    cd00096
    Location:211 → 216
    Ig; Ig strand A [structural motif]
    cd05865
    Location:20 → 116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  16. XM_008020883.2 → XP_008019074.1  neural cell adhesion molecule 1 isoform X16

    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 412
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:428 → 496
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:508 → 605
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:612 → 693
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  17. XM_008020882.2 → XP_008019073.1  neural cell adhesion molecule 1 isoform X15

    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 412
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:428 → 496
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:508 → 605
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:613 → 694
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  18. XM_008020885.2 → XP_008019076.1  neural cell adhesion molecule 1 isoform X14

    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 412
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:428 → 496
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:508 → 605
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:634 → 715
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain
Nucleotide Protein
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