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B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248086, updated on 11-Mar-2024

Summary

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Gene symbol
B3GNT6
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6
See related
Ensembl:ENSCSAG00000000617
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See B3GNT6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (57525608..57529943, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (68247073..68249569)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene myosin VIIA Neighboring gene calpain 5 Neighboring gene alkaline ceramidase 3 Neighboring gene tsukushi, small leucine rich proteoglycan

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    57525608..57529943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008020219.2 → XP_008018410.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A0D9S950
    Related
    ENSCSAP00000017389.1
    Conserved Domains (2) summary
    cl21454
    Location:31 → 185
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl21608
    Location:131 → 323
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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