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GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103248060, updated on 11-Mar-2024

Summary

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Gene symbol
GDPD5
Gene description
glycerophosphodiester phosphodiesterase domain containing 5
See related
Ensembl:ENSCSAG00000003915
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See GDPD5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666043.1 (59050167..59140696)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 1 NC_023642.1 (66665496..66755712, complement)

NW_023666043.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 6 Neighboring gene serpin family H member 1 Neighboring gene SIN3-HDAC complex-associated factor Neighboring gene kelch like family member 35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphodiester phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666043.1 Reference Vero_WHO_p1.0

    Range
    59050167..59140696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038005461.1 → XP_037861389.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QV88
    Conserved Domains (1) summary
    cd08608
    Location:227 → 581
    GDPD_GDE2; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

  2. XM_038005459.1 → XP_037861387.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QV88
    Conserved Domains (1) summary
    cd08608
    Location:227 → 581
    GDPD_GDE2; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

  3. XM_008020175.2 → XP_008018366.2  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QV88
    Conserved Domains (1) summary
    cd08608
    Location:227 → 581
    GDPD_GDE2; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

  4. XM_008020178.2 → XP_008018369.2  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A0D9QV88
    Conserved Domains (1) summary
    cd08608
    Location:227 → 576
    GDPD_GDE2; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

  5. XM_038005460.1 → XP_037861388.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QV88
    Conserved Domains (1) summary
    cd08608
    Location:227 → 581
    GDPD_GDE2; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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