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GALNT17 polypeptide N-acetylgalactosaminyltransferase 17 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103246600, updated on 11-Mar-2024

Summary

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Gene symbol
GALNT17
Gene description
polypeptide N-acetylgalactosaminyltransferase 17
See related
Ensembl:ENSCSAG00000018272
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Also known as
WBSCR17
Orthologs
human mouse all
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Genomic context

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See GALNT17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666070.1 (12368906..12959570)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 28 NC_023669.1 (3637321..4227765, complement)

NW_023666070.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene activator of transcription and developmental regulator AUTS2 Neighboring gene tubulin gamma-1 chain-like Neighboring gene 40S ribosomal protein S28-like Neighboring gene calneuron 1 Neighboring gene S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 Neighboring gene high mobility group protein HMG-I/HMG-Y-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17
Names
Williams-Beuren syndrome chromosome region 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666070.1 Reference Vero_WHO_p1.0

    Range
    12368906..12959570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008018296.2 → XP_008016487.1  polypeptide N-acetylgalactosaminyltransferase 17 isoform X1

    See identical proteins and their annotated locations for XP_008016487.1

    UniProtKB/TrEMBL
    A0A0D9S098
    Related
    ENSCSAP00000014287.1
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:467 → 593
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_008018297.2 → XP_008016488.2  polypeptide N-acetylgalactosaminyltransferase 17 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:54 → 353
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:366 → 492
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
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