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SGCD sarcoglycan delta [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103244852, updated on 11-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666034.1 (18457325..19501690, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 23 NC_023664.1 (58095013..59177752)

NW_023666034.1Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit MIC26-like Neighboring gene U6 spliceosomal RNA Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene peptidyl-prolyl cis-trans isomerase G-like Neighboring gene CST complex subunit STN1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666034.1 Reference Vero_WHO_p1.0

    Range
    18457325..19501690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038005626.1 → XP_037861554.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_038005628.1 → XP_037861556.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_008015117.2 → XP_008013308.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_008013308.1

    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_008015125.2 → XP_008013316.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_008013316.1

    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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