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CHSY3 chondroitin sulfate synthase 3 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103244479, updated on 11-Mar-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See CHSY3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666034.1 (44921259..45206662, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 23 NC_023664.1 (32803714..33088720)

NW_023666034.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like protein 2-binding protein Neighboring gene U7 small nuclear RNA Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666034.1 Reference Vero_WHO_p1.0

    Range
    44921259..45206662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008014314.2 → XP_008012505.2  chondroitin sulfate synthase 3

    Conserved Domains (3) summary
    PRK14959
    Location:6 → 135
    PRK14959; DNA polymerase III subunits gamma and tau; Provisional
    pfam05679
    Location:328 → 864
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:173 → 398
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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