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RGMB repulsive guidance molecule BMP co-receptor b [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103244263, updated on 11-Mar-2024

Summary

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Gene symbol
RGMB
Gene description
repulsive guidance molecule BMP co-receptor b
See related
Ensembl:ENSCSAG00000015350
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See RGMB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666036.1 (12119736..12147699, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 23 NC_023664.1 (2339567..2368239)

NW_023666036.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like Neighboring gene ATP-dependent RNA helicase DDX18-like Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RGM domain family member B
Names
repulsive guidance molecule family member b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666036.1 Reference Vero_WHO_p1.0

    Range
    12119736..12147699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008014040.2 → XP_008012231.2  RGM domain family member B isoform X1

    UniProtKB/TrEMBL
    A0A0D9RS55
    Conserved Domains (2) summary
    pfam06534
    Location:267 → 441
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:95 → 262
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  2. XM_037985324.1 → XP_037841252.1  RGM domain family member B isoform X2

    UniProtKB/TrEMBL
    A0A0D9RS55
    Conserved Domains (2) summary
    pfam06534
    Location:226 → 400
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:54 → 221
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  3. XM_008014041.2 → XP_008012232.2  RGM domain family member B isoform X1

    UniProtKB/TrEMBL
    A0A0D9RS55
    Conserved Domains (2) summary
    pfam06534
    Location:267 → 441
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:95 → 262
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  4. XM_037985328.1 → XP_037841256.1  RGM domain family member B isoform X2

    UniProtKB/TrEMBL
    A0A0D9RS55
    Conserved Domains (2) summary
    pfam06534
    Location:226 → 400
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:54 → 221
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
Nucleotide Protein
Heading Accession and Version

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