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B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103243634, updated on 11-Mar-2024

Summary

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Gene symbol
B4GALNT2
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)
See related
Ensembl:ENSCSAG00000002479
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See B4GALNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666077.1 (40643084..40682484)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 16 NC_023657.1 (69538167..69575416)

NW_023666077.1Genomic Context describing neighboring genes Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene COX assembly mitochondrial protein homolog Neighboring gene uncharacterized LOC119622171 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene G protein subunit gamma transducin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666077.1 Reference Vero_WHO_p1.0

    Range
    40643084..40682484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008013044.2 → XP_008011235.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A0D9S3X6
    Related
    ENSCSAP00000015565.1
    Conserved Domains (2) summary
    COG0463
    Location:262 → 363
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam00535
    Location:264 → 370
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_008013043.2 → XP_008011234.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X1

    Conserved Domains (2) summary
    COG0463
    Location:296 → 397
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam00535
    Location:298 → 404
    Glycos_transf_2; Glycosyl transferase family 2

  3. XM_037993689.1 → XP_037849617.1  beta-1,4 N-acetylgalactosaminyltransferase 2 isoform X3

    Conserved Domains (1) summary
    pfam00535
    Location:298 → 399
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein
Heading Accession and Version

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