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SPHK1 sphingosine kinase 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103242988, updated on 11-Mar-2024

Summary

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Gene symbol
SPHK1
Gene description
sphingosine kinase 1
See related
Ensembl:ENSCSAG00000005041
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See SPHK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666077.1 (16031997..16036965, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 16 NC_023657.1 (45290147..45295175, complement)

NW_023666077.1Genomic Context describing neighboring genes Neighboring gene aralkylamine N-acetyltransferase Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene 60S ribosomal protein L7-like Neighboring gene phosphoribosyl pyrophosphate synthetase associated protein 1 Neighboring gene small nucleolar RNA U13 Neighboring gene glutamine rich 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666077.1 Reference Vero_WHO_p1.0

    Range
    16031997..16036965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008011634.2 → XP_008009825.1  sphingosine kinase 1 isoform X2

    See identical proteins and their annotated locations for XP_008009825.1

    Conserved Domains (1) summary
    PLN02958
    Location:11 → 345
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  2. XM_037993132.1 → XP_037849060.1  sphingosine kinase 1 isoform X2

    Conserved Domains (1) summary
    PLN02958
    Location:11 → 345
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  3. XM_008011633.2 → XP_008009824.1  sphingosine kinase 1 isoform X2

    See identical proteins and their annotated locations for XP_008009824.1

    Conserved Domains (1) summary
    PLN02958
    Location:11 → 345
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase

  4. XM_008011632.2 → XP_008009823.1  sphingosine kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QYC2
    Related
    ENSCSAP00000001361.1
    Conserved Domains (2) summary
    PLN02958
    Location:97 → 431
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
    pfam00781
    Location:102 → 207
    DAGK_cat; Diacylglycerol kinase catalytic domain
Nucleotide Protein
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