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RTN4RL1 reticulon 4 receptor like 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103242122, updated on 11-Mar-2024

Summary

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Gene symbol
RTN4RL1
Gene description
reticulon 4 receptor like 1
See related
Ensembl:ENSCSAG00000013825
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See RTN4RL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666059.1 (20302293..20395683)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 16 NC_023657.1 (1576264..1665130, complement)

NW_023666059.1Genomic Context describing neighboring genes Neighboring gene HIC ZBTB transcriptional repressor 1 Neighboring gene OVCA2 serine hydrolase domain containing Neighboring gene diphthamide biosynthesis 1 Neighboring gene replication protein A1 Neighboring gene SET and MYND domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666059.1 Reference Vero_WHO_p1.0

    Range
    20302293..20395683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008009808.2 → XP_008007999.1  reticulon-4 receptor-like 1

    UniProtKB/TrEMBL
    A0A0D9RMY4
    Related
    ENSCSAP00000009973.1
    Conserved Domains (5) summary
    cd00116
    Location:102 → 256
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:57 → 77
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:150 → 190
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:174 → 233
    LRR_8; Leucine rich repeat
    cl15307
    Location:255 → 300
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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