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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103239988, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
See related
Ensembl:ENSCSAG00000017409
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666040.1 (181063803..181307482)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 13 NC_023654.1 (4845481..5087558)

NW_023666040.1Genomic Context describing neighboring genes Neighboring gene TTK protein kinase Neighboring gene adenylate kinase 4, mitochondrial-like Neighboring gene 60S ribosomal protein L17-like Neighboring gene uncharacterized LOC103239986

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666040.1 Reference Vero_WHO_p1.0

    Range
    181063803..181307482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008006436.2 → XP_008004627.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_008004627.1

    UniProtKB/TrEMBL
    A0A0D9RXV4
    Related
    ENSCSAP00000013443.1
    Conserved Domains (1) summary
    PTZ00182
    Location:38 → 390
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional

  2. XM_038002194.1 → XP_037858122.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A0D9RXV4
    Conserved Domains (1) summary
    PTZ00182
    Location:38 → 390
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional

  3. XM_008006435.2 → XP_008004626.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X2

    Conserved Domains (2) summary
    cd07036
    Location:75 → 241
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    pfam02780
    Location:262 → 347
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
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