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ABO ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103239700, updated on 11-Mar-2024

Summary

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Gene symbol
ABO
Gene description
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
See related
Ensembl:ENSCSAG00000015193
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See ABO in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666079.1 (10775478..10796102, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 12 NC_023653.1 (4863100..4892204)

NW_023666079.1Genomic Context describing neighboring genes Neighboring gene odorant binding protein 2B Neighboring gene transcriptional regulator Kaiso-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histo-blood group ABO system transferase
Names
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666079.1 Reference Vero_WHO_p1.0

    Range
    10775478..10796102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008005797.2 → XP_008003988.1  histo-blood group ABO system transferase isoform X4

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:45 → 334
    Glyco_transf_6; Glycosyltransferase family 6

  2. XM_008005795.2 → XP_008003986.2  histo-blood group ABO system transferase isoform X3

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:53 → 337
    Glyco_transf_6; Glycosyltransferase family 6

  3. XM_008005794.2 → XP_008003985.2  histo-blood group ABO system transferase isoform X2

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:64 → 353
    Glyco_transf_6; Glycosyltransferase family 6

  4. XM_037994232.1 → XP_037850160.1  histo-blood group ABO system transferase isoform X1

    Conserved Domains (1) summary
    pfam03414
    Location:83 → 364
    Glyco_transf_6; Glycosyltransferase family 6

  5. XM_008005803.2 → XP_008003994.1  histo-blood group ABO system transferase isoform X5

    See identical proteins and their annotated locations for XP_008003994.1

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:1 → 285
    Glyco_transf_6; Glycosyltransferase family 6

  6. XM_008005802.2 → XP_008003993.1  histo-blood group ABO system transferase isoform X5

    See identical proteins and their annotated locations for XP_008003993.1

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:1 → 285
    Glyco_transf_6; Glycosyltransferase family 6

  7. XM_037994233.1 → XP_037850161.1  histo-blood group ABO system transferase isoform X5

    UniProtKB/TrEMBL
    A0A0D9RRQ2
    Conserved Domains (1) summary
    pfam03414
    Location:1 → 285
    Glyco_transf_6; Glycosyltransferase family 6
Nucleotide Protein
Heading Accession and Version

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