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DCN decorin [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103238850, updated on 11-Mar-2024

Summary

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Gene symbol
DCN
Gene description
decorin
See related
Ensembl:ENSCSAG00000003736
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See DCN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666037.1 (158594516..158631419)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 11 NC_023652.1 (86552392..86590229, complement)

NW_023666037.1Genomic Context describing neighboring genes Neighboring gene BTG anti-proliferation factor 1 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene lumican Neighboring gene keratocan

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
decorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666037.1 Reference Vero_WHO_p1.0

    Range
    158594516..158631419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008004232.2 → XP_008002423.1  decorin

    See identical proteins and their annotated locations for XP_008002423.1

    UniProtKB/TrEMBL
    A0A0D9QUR6
    Conserved Domains (3) summary
    PRK15370
    Location:70 → 298
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:62 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01462
    Location:54 → 80
    LRRNT; Leucine rich repeat N-terminal domain

  2. XM_037996719.1 → XP_037852647.1  decorin

    UniProtKB/TrEMBL
    A0A0D9QUR6
    Conserved Domains (3) summary
    PRK15370
    Location:70 → 298
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:62 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01462
    Location:54 → 80
    LRRNT; Leucine rich repeat N-terminal domain

  3. XM_008004231.2 → XP_008002422.1  decorin

    See identical proteins and their annotated locations for XP_008002422.1

    UniProtKB/TrEMBL
    A0A0D9QUR6
    Related
    ENSCSAP00000000105.1
    Conserved Domains (3) summary
    PRK15370
    Location:70 → 298
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:62 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam01462
    Location:54 → 80
    LRRNT; Leucine rich repeat N-terminal domain
Nucleotide Protein
Heading Accession and Version

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