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UBXN2B UBX domain protein 2B [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103236847, updated on 11-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
Ensembl:ENSCSAG00000014542
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666039.1 (87290626..87329624, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 8 NC_023649.1 (54397523..54436468)

NW_023666039.1Genomic Context describing neighboring genes Neighboring gene syndecan binding protein Neighboring gene cytochrome P450 family 7 subfamily A member 1 Neighboring gene tyrosine-protein phosphatase non-receptor type 11-like Neighboring gene family with sequence similarity 110 member B Neighboring gene 60S ribosomal protein L14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666039.1 Reference Vero_WHO_p1.0

    Range
    87290626..87329624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008000701.2 → XP_007998892.2  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A0D9RPX4
    Conserved Domains (2) summary
    smart00553
    Location:140 → 232
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd17161
    Location:250 → 331
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

  2. XM_038000472.1 → XP_037856400.1  UBX domain-containing protein 2B isoform X2

    Conserved Domains (1) summary
    pfam08059
    Location:146 → 178
    SEP; SEP domain
Nucleotide Protein
Heading Accession and Version

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