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FBXO17 F-box protein 17 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103234650, updated on 11-Mar-2024

Summary

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Gene symbol
FBXO17
Gene description
F-box protein 17
See related
Ensembl:ENSCSAG00000003927
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See FBXO17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666073.1 (11578189..11613057, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 6 NC_023647.1 (33555689..33590776, complement)

NW_023666073.1Genomic Context describing neighboring genes Neighboring gene coiled-coil glutamate rich protein 2 Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene mitochondrial ribosomal protein S12 Neighboring gene F-box protein 27 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666073.1 Reference Vero_WHO_p1.0

    Range
    11578189..11613057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007996736.2 → XP_007994927.1  F-box only protein 17 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QVA3
    Related
    ENSCSAP00000000292.1
    Conserved Domains (2) summary
    pfam04300
    Location:100 → 273
    FBA; F-box associated region
    pfam12937
    Location:18 → 59
    F-box-like

  2. XM_037991643.1 → XP_037847571.1  F-box only protein 17 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QVA3
    Conserved Domains (2) summary
    pfam04300
    Location:100 → 273
    FBA; F-box associated region
    pfam12937
    Location:18 → 59
    F-box-like

  3. XM_037991642.1 → XP_037847570.1  F-box only protein 17 isoform X3

    Conserved Domains (2) summary
    pfam04300
    Location:100 → 234
    FBA; F-box associated region
    pfam12937
    Location:18 → 59
    F-box-like

  4. XM_037991641.1 → XP_037847569.1  F-box only protein 17 isoform X2

    Conserved Domains (2) summary
    pfam04300
    Location:100 → 232
    FBA; F-box associated region
    pfam12937
    Location:18 → 59
    F-box-like
Nucleotide Protein
Heading Accession and Version

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