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ACER1 alkaline ceramidase 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103234341, updated on 11-Mar-2024

Summary

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Gene symbol
ACER1
Gene description
alkaline ceramidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See ACER1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666081.1 (2050460..2092860)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 6 NC_023647.1 (5949286..5978282, complement)

NW_023666081.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 7 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene MLLT1 super elongation complex subunit Neighboring gene uncharacterized LOC119622455 Neighboring gene acyl-CoA synthetase bubblegum family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666081.1 Reference Vero_WHO_p1.0

    Range
    2050460..2092860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037994455.1 → XP_037850383.1  alkaline ceramidase 1 isoform X1

    Conserved Domains (1) summary
    pfam05875
    Location:1 → 212
    Ceramidase

  2. XM_037994456.1 → XP_037850384.1  alkaline ceramidase 1 isoform X2

    Conserved Domains (1) summary
    pfam05875
    Location:3 → 255
    Ceramidase
Nucleotide Protein
Heading Accession and Version

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