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LOC103230506 torsin-1A-interacting protein 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103230506, updated on 16-Nov-2023

Summary

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Gene symbol
LOC103230506
Gene description
torsin-1A-interacting protein 2
See related
Ensembl:ENSCSAG00000012239
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Also known as
TOR1AIP2
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Genomic context

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See LOC103230506 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666055.1 (50891475..50931101)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 25 NC_023666.1 (49496515..49532881)

NW_023666055.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 350 Neighboring gene 40S ribosomal protein SA-like Neighboring gene torsin 1A interacting protein 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene family with sequence similarity 163 member A Neighboring gene tudor domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666055.1 Reference Vero_WHO_p1.0

    Range
    50891475..50931101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037985875.1 → XP_037841803.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A0D9RII3
    Conserved Domains (1) summary
    pfam05609
    Location:15 → 458
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_037985874.1 → XP_037841802.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A0D9RII3
    Conserved Domains (1) summary
    pfam05609
    Location:15 → 458
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_007989327.2 → XP_007987518.2  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A0D9RII3
    Conserved Domains (1) summary
    pfam05609
    Location:15 → 458
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_037985877.1 → XP_037841805.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A0D9RII3
    Conserved Domains (1) summary
    pfam05609
    Location:15 → 458
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_037985876.1 → XP_037841804.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A0D9RII3
    Conserved Domains (1) summary
    pfam05609
    Location:15 → 458
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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