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CNTN2 contactin 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103230241, updated on 11-Mar-2024

Summary

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Gene symbol
CNTN2
Gene description
contactin 2
See related
Ensembl:ENSCSAG00000014592
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666055.1 (25018404..25053686, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 25 NC_023666.1 (24262092..24296740, complement)

NW_023666055.1Genomic Context describing neighboring genes Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene transmembrane protein 81 Neighboring gene neurofascin Neighboring gene 60S ribosomal protein L13a-like Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666055.1 Reference Vero_WHO_p1.0

    Range
    25018404..25053686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007988767.2 → XP_007986958.1  contactin-2

    UniProtKB/TrEMBL
    A0A0D9RQ24
    Related
    ENSCSAP00000010713.1
    Conserved Domains (9) summary
    cd04968
    Location:239 → 324
    Ig3_Contactin_like; Third Ig domain of contactin
    cd04969
    Location:433 → 505
    Ig5_Contactin_like; Fifth Ig domain of contactin
    cd05727
    Location:131 → 228
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:328 → 412
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05850
    Location:36 → 129
    Ig1_Contactin-2; First Ig domain of contactin-2
    cd05854
    Location:524 → 603
    Ig6_Contactin-2; Sixth Ig domain of contactin-2
    smart00410
    Location:246 → 323
    IG_like; Immunoglobulin like
    cd00063
    Location:815 → 907
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:327 → 412
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
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