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CHST13 carbohydrate sulfotransferase 13 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103228121, updated on 11-Mar-2024

Summary

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Gene symbol
CHST13
Gene description
carbohydrate sulfotransferase 13
See related
Ensembl:ENSCSAG00000008104
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See CHST13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666041.1 (111802094..111820440)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 22 NC_023663.1 (54471165..54491436, complement)

NW_023666041.1Genomic Context describing neighboring genes Neighboring gene ZXD family zinc finger C Neighboring gene urocanate hydratase 1 Neighboring gene chromosome unknown C3orf22 homolog Neighboring gene thioredoxin reductase 3 Neighboring gene rRNA N6-adenosine-methyltransferase METTL5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666041.1 Reference Vero_WHO_p1.0

    Range
    111802094..111820440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007985508.2 → XP_007983699.1  carbohydrate sulfotransferase 13

    UniProtKB/TrEMBL
    A0A0D9R6X4
    Related
    ENSCSAP00000004363.1
    Conserved Domains (1) summary
    pfam03567
    Location:102 → 332
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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