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MSLN mesothelin [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103225689, updated on 11-Mar-2024

Summary

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Gene symbol
MSLN
Gene description
mesothelin
See related
Ensembl:ENSCSAG00000012142
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See MSLN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666068.1 (30446301..30455280, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 5 NC_023646.1 (681923..690530)

NW_023666068.1Genomic Context describing neighboring genes Neighboring gene RNA pseudouridine synthase domain containing 1 Neighboring gene mesothelin-like protein Neighboring gene uncharacterized LOC119621142 Neighboring gene cytosolic iron-sulfur assembly component 3 Neighboring gene hydroxyacylglutathione hydrolase like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mesothelin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666068.1 Reference Vero_WHO_p1.0

    Range
    30446301..30455280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007980788.2 → XP_007978979.2  mesothelin isoform X3

    UniProtKB/TrEMBL
    A0A0D9RI80
    Conserved Domains (1) summary
    pfam06060
    Location:1 → 547
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)

  2. XM_007980760.2 → XP_007978951.2  mesothelin isoform X1

    UniProtKB/TrEMBL
    A0A0D9RI80
    Conserved Domains (1) summary
    pfam06060
    Location:1 → 622
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)

  3. XM_007980778.2 → XP_007978969.2  mesothelin isoform X2

    UniProtKB/TrEMBL
    A0A0D9RI80
    Conserved Domains (1) summary
    pfam06060
    Location:1 → 608
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)
Nucleotide Protein
Heading Accession and Version

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