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UTP11 UTP11 small subunit processome component [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103225078, updated on 11-Mar-2024

Summary

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Gene symbol
UTP11
Gene description
UTP11 small subunit processome component
See related
Ensembl:ENSCSAG00000001122
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See UTP11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666033.1 (21967810..21980384)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 20 NC_023661.1 (94845537..94858198, complement)

NW_023666033.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene four and a half LIM domains 3 Neighboring gene POU class 3 homeobox 1 Neighboring gene uncharacterized LOC103225076

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable U3 small nucleolar RNA-associated protein 11
Names
UTP11, small subunit processome component homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666033.1 Reference Vero_WHO_p1.0

    Range
    21967810..21980384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007979321.2 → XP_007977512.1  probable U3 small nucleolar RNA-associated protein 11 isoform X2

    Conserved Domains (1) summary
    pfam03998
    Location:13 → 201
    Utp11; Utp11 protein

  2. XM_007979320.2 → XP_007977511.1  probable U3 small nucleolar RNA-associated protein 11 isoform X1

    See identical proteins and their annotated locations for XP_007977511.1

    UniProtKB/TrEMBL
    A0A0D9S7Q2
    Related
    ENSCSAP00000016891.1
    Conserved Domains (1) summary
    pfam03998
    Location:13 → 253
    Utp11; Utp11 protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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