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PLD1 phospholipase D1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103221251, updated on 11-Mar-2024

Summary

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Gene symbol
PLD1
Gene description
phospholipase D1
See related
Ensembl:ENSCSAG00000012767
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See PLD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666063.1 (26423171..26629555)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 15 NC_023656.1 (17667079..17871452)

NW_023666063.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 3B Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene transmembrane protein 212 Neighboring gene small nucleolar RNA U13 Neighboring gene transmembrane protein 183A-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microvillus assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666063.1 Reference Vero_WHO_p1.0

    Range
    26423171..26629555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007972100.2 → XP_007970291.2  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9RK06
    Conserved Domains (1) summary
    PLN02866
    Location:82 → 1059
    PLN02866; phospholipase D

  2. XM_007972101.2 → XP_007970292.2  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9RK06
    Conserved Domains (1) summary
    PLN02866
    Location:82 → 1059
    PLN02866; phospholipase D

  3. XM_007972099.2 → XP_007970290.2  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9RK06
    Conserved Domains (1) summary
    PLN02866
    Location:82 → 1059
    PLN02866; phospholipase D

  4. XM_007972102.2 → XP_007970293.1  phospholipase D1 isoform X2

    UniProtKB/TrEMBL
    A0A0D9RK06
    Conserved Domains (5) summary
    cd07296
    Location:78 → 209
    PX_PLD1; The phosphoinositide binding Phox Homology domain of Phospholipase D1
    cd09842
    Location:352 → 502
    PLDc_vPLD1_1; Catalytic domain, repeat 1, of vertebrate phospholipase D1
    cd09844
    Location:716 → 897
    PLDc_vPLD1_2; Catalytic domain, repeat 2, of vertebrate phospholipase D1
    PLN02866
    Location:82 → 1021
    PLN02866; phospholipase D
    cd01254
    Location:197 → 326
    PH_PLD; Phospholipase D pleckstrin homology (PH) domain
Nucleotide Protein
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