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ACER2 alkaline ceramidase 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103219398, updated on 11-Mar-2024

Summary

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Gene symbol
ACER2
Gene description
alkaline ceramidase 2
See related
Ensembl:ENSCSAG00000009413
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See ACER2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666038.1 (48397984..48467119, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 12 NC_023653.1 (60286802..60323359, complement)

NW_023666038.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 2 Neighboring gene transmembrane protein 230-like Neighboring gene microtubule-associated proteins 1A/1B light chain 3B Neighboring gene DENN domain containing 4C Neighboring gene ribosomal protein S6 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like Neighboring gene perilipin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666038.1 Reference Vero_WHO_p1.0

    Range
    48397984..48467119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007969130.2 → XP_007967321.1  alkaline ceramidase 2 isoform X1

    See identical proteins and their annotated locations for XP_007967321.1

    Conserved Domains (1) summary
    pfam05875
    Location:13 → 261
    Ceramidase

  2. XM_037998359.1 → XP_037854287.1  alkaline ceramidase 2 isoform X2

    UniProtKB/TrEMBL
    A0A0D9RAM2
    Conserved Domains (1) summary
    pfam05875
    Location:1 → 212
    Ceramidase
Nucleotide Protein
Heading Accession and Version

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