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B3GALT5 beta-1,3-galactosyltransferase 5 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103218998, updated on 14-Nov-2024

Summary

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Gene symbol
B3GALT5
Gene description
beta-1,3-galactosyltransferase 5
See related
Ensembl:ENSCSAG00000018714
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See B3GALT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666054.1 (11363234..11466464)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 2 NC_023643.1 (83561817..83606342)

NW_023666054.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119619307 Neighboring gene guided entry of tail-anchored proteins factor 1 Neighboring gene lebercilin LCA5 like Neighboring gene putative uncharacterized protein B3GALT5-AS1 Neighboring gene immunoglobulin superfamily member 5 Neighboring gene immunoglobulin superfamily member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666054.1 Reference Vero_WHO_p1.0

    Range
    11363234..11466464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037984833.1 → XP_037840761.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  2. XM_037984834.1 → XP_037840762.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  3. XM_037984832.1 → XP_037840760.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  4. XM_007968399.2 → XP_007966590.1  beta-1,3-galactosyltransferase 5

    See identical proteins and their annotated locations for XP_007966590.1

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  5. XM_037984836.1 → XP_037840764.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  6. XM_037984837.1 → XP_037840765.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  7. XM_007968391.2 → XP_007966582.1  beta-1,3-galactosyltransferase 5

    See identical proteins and their annotated locations for XP_007966582.1

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  8. XM_007968383.2 → XP_007966574.1  beta-1,3-galactosyltransferase 5

    See identical proteins and their annotated locations for XP_007966574.1

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase

  9. XM_037984835.1 → XP_037840763.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A0D9SBJ7
    Conserved Domains (1) summary
    cl21608
    Location:72 → 262
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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