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AGPS alkylglycerone phosphate synthase [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103217394, updated on 11-Mar-2024

Summary

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Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
See related
Ensembl:ENSCSAG00000014345
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666040.1 (136479515..136640249, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 10 NC_023651.1 (62943914..63101644)

NW_023666040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103217399 Neighboring gene tetratricopeptide repeat protein 30B Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666040.1 Reference Vero_WHO_p1.0

    Range
    136479515..136640249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007965446.2 → XP_007963637.2  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X2

    UniProtKB/TrEMBL
    A0A0D9RPD5
    Conserved Domains (1) summary
    COG0277
    Location:226 → 678
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]

  2. XM_007965445.2 → XP_007963636.2  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1

    UniProtKB/TrEMBL
    A0A0D9RPD5
    Conserved Domains (1) summary
    COG0277
    Location:226 → 699
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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