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CERS6 ceramide synthase 6 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103217252, updated on 11-Mar-2024

Summary

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Gene symbol
CERS6
Gene description
ceramide synthase 6
See related
Ensembl:ENSCSAG00000015330
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See CERS6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666040.1 (145236257..145554226, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 10 NC_023651.1 (53972795..54299721)

NW_023666040.1Genomic Context describing neighboring genes Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene nitric oxide synthase trafficking Neighboring gene uncharacterized LOC119625350 Neighboring gene uncharacterized LOC119625349 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119625348 Neighboring gene serine/threonine kinase 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666040.1 Reference Vero_WHO_p1.0

    Range
    145236257..145554226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007965259.2 → XP_007963450.1  ceramide synthase 6 isoform X1

    UniProtKB/TrEMBL
    A0A0D9RS37
    Related
    ENSCSAP00000011426.1
    Conserved Domains (2) summary
    cd00086
    Location:80 → 127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain

  2. XM_007965260.2 → XP_007963451.1  ceramide synthase 6 isoform X2

    Conserved Domains (2) summary
    cd00086
    Location:80 → 127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

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