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GFRA1 GDNF family receptor alpha 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103216564, updated on 11-Mar-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
Ensembl:ENSCSAG00000004880
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666048.1 (70112995..70332336, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 9 NC_023650.1 (108869444..109088803, complement)

NW_023666048.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene attractin like 1 Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene coiled-coil domain containing 172

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666048.1 Reference Vero_WHO_p1.0

    Range
    70112995..70332336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007964180.2 → XP_007962371.1  GDNF family receptor alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_007962371.1

    UniProtKB/TrEMBL
    A0A0D9QXW6
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  2. XM_007964182.2 → XP_007962373.1  GDNF family receptor alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_007962373.1

    UniProtKB/TrEMBL
    A0A0D9QXW6
    Related
    ENSCSAP00000001205.1
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  3. XM_007964183.2 → XP_007962374.1  GDNF family receptor alpha-1 isoform X2

    Conserved Domains (2) summary
    smart00907
    Location:149 → 228
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:238 → 332
    GDNF; GDNF/GAS1 domain

  4. XM_007964179.2 → XP_007962370.1  GDNF family receptor alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_007962370.1

    UniProtKB/TrEMBL
    A0A0D9QXW6
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  5. XM_007964181.2 → XP_007962372.1  GDNF family receptor alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_007962372.1

    UniProtKB/TrEMBL
    A0A0D9QXW6
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  6. XM_038009585.1 → XP_037865513.1  GDNF family receptor alpha-1 isoform X2

    Conserved Domains (2) summary
    smart00907
    Location:149 → 228
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:238 → 332
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
Heading Accession and Version

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