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SFTPC surfactant protein C [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103215445, updated on 11-Mar-2024

Summary

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Gene symbol
SFTPC
Gene description
surfactant protein C
See related
Ensembl:ENSCSAG00000016543
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See SFTPC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666052.1 (22002517..22009591, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 8 NC_023649.1 (20229756..20233568)

NW_023666052.1Genomic Context describing neighboring genes Neighboring gene phytanoyl-CoA 2-hydroxylase interacting protein Neighboring gene bone morphogenetic protein 1 Neighboring gene leucine rich repeat LGI family member 3 Neighboring gene receptor accessory protein 4 Neighboring gene HR lysine demethylase and nuclear receptor corepressor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory gaseous exchange by respiratory system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in alveolar lamellar body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666052.1 Reference Vero_WHO_p1.0

    Range
    22002517..22009591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037983688.1 → XP_037839616.1  pulmonary surfactant-associated protein C isoform X3

    UniProtKB/TrEMBL
    A0A0D9RVG7
    Conserved Domains (1) summary
    smart00019
    Location:39 → 229
    SF_P; Pulmonary surfactant proteins

  2. XM_037983689.1 → XP_037839617.1  pulmonary surfactant-associated protein C isoform X3

    UniProtKB/TrEMBL
    A0A0D9RVG7
    Conserved Domains (1) summary
    smart00019
    Location:39 → 229
    SF_P; Pulmonary surfactant proteins

  3. XM_037983687.1 → XP_037839615.1  pulmonary surfactant-associated protein C isoform X2

    UniProtKB/TrEMBL
    A0A0D9RVG7
    Conserved Domains (1) summary
    smart00019
    Location:1 → 191
    SF_P; Pulmonary surfactant proteins

  4. XM_037983690.1 → XP_037839618.1  pulmonary surfactant-associated protein C isoform X2

    UniProtKB/TrEMBL
    A0A0D9RVG7
    Conserved Domains (1) summary
    smart00019
    Location:1 → 191
    SF_P; Pulmonary surfactant proteins

  5. XM_037983691.1 → XP_037839619.1  pulmonary surfactant-associated protein C isoform X3

    UniProtKB/TrEMBL
    A0A0D9RVG7
    Conserved Domains (1) summary
    smart00019
    Location:39 → 229
    SF_P; Pulmonary surfactant proteins

  6. XM_037983686.1 → XP_037839614.1  pulmonary surfactant-associated protein C isoform X1

    Conserved Domains (1) summary
    smart00019
    Location:39 → 197
    SF_P; Pulmonary surfactant proteins
Nucleotide Protein
Heading Accession and Version

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